Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 AC079776.1-201ENST00000401540 1152 ntBASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 AC134915.1-201ENST00000426461 574 ntBASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 VDAC1P7-201ENST00000462417 847 ntBASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 AC120045.2-201ENST00000567334 178 ntBASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 AC015910.1-201ENST00000579400 975 ntBASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 CU634019.7-201ENST00000624153 1185 ntBASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 FP236241.2-201ENST00000624906 1185 ntBASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 AC024909.3-201ENST00000611513 2257 ntBASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 SOCS2P1-201ENST00000417727 557 ntBASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 ARSEP1-201ENST00000420443 635 ntBASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 AC008735.3-201ENST00000596646 500 ntBASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLCF1Q9UBD9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms