Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 ARSEP1-201ENST00000420443 635 ntBASIC14.43□□□□□ -0.1
LRFN1Q9P244 AL162726.2-201ENST00000438986 1017 ntBASIC14.43□□□□□ -0.1
LRFN1Q9P244 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 IGHV3-71-201ENST00000523324 359 ntBASIC14.43□□□□□ -0.1
LRFN1Q9P244 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 KRT17P8-201ENST00000540749 863 ntBASIC14.43□□□□□ -0.1
LRFN1Q9P244 HILS1-202ENST00000545329 423 ntBASIC14.43□□□□□ -0.1
LRFN1Q9P244 AC106886.1-201ENST00000568660 600 ntBASIC14.43□□□□□ -0.1
LRFN1Q9P244 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LRFN1Q9P244 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRFN1Q9P244 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 KRT8P22-201ENST00000562317 1415 ntBASIC14.42□□□□□ -0.1
LRFN1Q9P244 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.42□□□□□ -0.1
LRFN1Q9P244 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 RAB43P1-201ENST00000561790 589 ntBASIC14.42□□□□□ -0.1
LRFN1Q9P244 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 BRI3BPP1-201ENST00000594224 787 ntBASIC14.42□□□□□ -0.1
LRFN1Q9P244 AC010319.3-201ENST00000597028 470 ntBASIC14.42□□□□□ -0.1
LRFN1Q9P244 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms