Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 AC004466.1-201ENST00000599515 1080 ntBASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 COX6A1P2-201ENST00000620597 330 ntBASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRP1BQ9NZR2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 FAM8A4P-201ENST00000435433 1213 ntBASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 MESTP3-201ENST00000503460 968 ntBASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 SLC16A6P1-201ENST00000413214 1059 ntBASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 TMCO5B-205ENST00000530020 894 ntBASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 AC097065.1-201ENST00000425737 517 ntBASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 AC013355.1-201ENST00000562625 723 ntBASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 AC006449.6-201ENST00000612330 2296 ntBASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 AL139008.1-201ENST00000437894 228 ntBASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 MIR4313-201ENST00000580760 101 ntBASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
LRP1BQ9NZR2 KRT8P14-201ENST00000414254 1442 ntBASIC9.72□□□□□ -0.85
LRP1BQ9NZR2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LRP1BQ9NZR2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms