Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 C18orf15-201ENST00000623680 2534 ntBASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ECHDC1Q9NTX5 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 AC093004.1-201ENST00000508850 424 ntBASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ECHDC1Q9NTX5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 MEP1AP4-201ENST00000423244 1087 ntBASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ECHDC1Q9NTX5 AC126177.1-201ENST00000547829 2218 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms