Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 ST20-AS1-201ENST00000560255 4223 ntBASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 AL589702.1-201ENST00000641229 1509 ntBASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 AC009947.1-201ENST00000444350 727 ntBASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 FDX1P1-201ENST00000449115 551 ntBASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 AC002347.1-201ENST00000569543 541 ntBASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 WASH6P-202ENST00000359512 1437 ntBASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 TMBIM7P-203ENST00000641617 1718 ntBASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PCDHB16Q9NRJ7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
PCDHB16Q9NRJ7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCDHB16Q9NRJ7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.77□□□□□ -0.2
PCDHB16Q9NRJ7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCDHB16Q9NRJ7 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PCDHB16Q9NRJ7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 AL121894.2-201ENST00000602977 491 ntBASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 AC116407.3-201ENST00000623905 1129 ntBASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHB16Q9NRJ7 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 LINC00528-201ENST00000600723 2160 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms