Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC148477.4-201ENST00000613430 1793 ntBASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRTM1Q9HBL6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 AL607033.1-201ENST00000623900 1599 ntBASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 ALG1L8P-201ENST00000533887 760 ntBASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRTM1Q9HBL6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 KRT18P32-201ENST00000424695 1287 ntBASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 AC005829.1-201ENST00000570002 483 ntBASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 AC105021.1-202ENST00000570572 669 ntBASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRTM1Q9HBL6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.13■□□□□ 0.01
LRTM1Q9HBL6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms