Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP6V0A4Q9HBG4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 TOMM22P5-201ENST00000416399 439 ntBASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP6V0A4Q9HBG4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 AC123567.1-201ENST00000548294 1261 ntBASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 RRP7BP-205ENST00000566851 833 ntBASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 AL391069.4-201ENST00000609583 481 ntBASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
ATP6V0A4Q9HBG4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 HILS1-202ENST00000545329 423 ntBASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP6V0A4Q9HBG4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms