Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 OR4C5-201ENST00000319813 981 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 SNORA40.4-201ENST00000390971 128 ntBASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 NME2-201ENST00000393183 568 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AC243562.2-201ENST00000561247 970 ntBASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC01711-201ENST00000598340 967 ntBASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AC100814.1-201ENST00000606963 623 ntBASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AC012313.10-201ENST00000623509 926 ntBASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AC010507.1-201ENST00000633895 436 ntBASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 AC005840.4-201ENST00000541242 2494 ntBASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRTAP3-1Q9BYR8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms