Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 KRT18P56-201ENST00000507275 550 ntBASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 PRYP6-201ENST00000514804 343 ntBASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CMSS1Q9BQ75 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 AL031284.1-201ENST00000419297 478 ntBASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 AC140658.5-201ENST00000438532 169 ntBASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 AC009947.1-201ENST00000444350 727 ntBASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 AC093909.1-201ENST00000504731 1122 ntBASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 CICP24-201ENST00000605464 2705 ntBASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CMSS1Q9BQ75 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CMSS1Q9BQ75 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms