Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MTND6P24-201ENST00000440466 518 ntBASIC14.2□□□□□ -0.14
USB1Q9BQ65 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 TERF1P3-201ENST00000505638 1227 ntBASIC14.2□□□□□ -0.14
USB1Q9BQ65 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 AL138828.2-201ENST00000615812 383 ntBASIC14.2□□□□□ -0.14
USB1Q9BQ65 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.2□□□□□ -0.14
USB1Q9BQ65 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
USB1Q9BQ65 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 AC015656.1-201ENST00000624209 3578 ntBASIC14.19□□□□□ -0.14
USB1Q9BQ65 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 ELOCP6-201ENST00000429066 328 ntBASIC14.19□□□□□ -0.14
USB1Q9BQ65 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 TSPY16P-201ENST00000449843 468 ntBASIC14.19□□□□□ -0.14
USB1Q9BQ65 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 ELOCP12-201ENST00000458706 328 ntBASIC14.19□□□□□ -0.14
USB1Q9BQ65 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 AL079307.3-201ENST00000556114 283 ntBASIC14.19□□□□□ -0.14
USB1Q9BQ65 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
USB1Q9BQ65 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
USB1Q9BQ65 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
USB1Q9BQ65 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USB1Q9BQ65 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.18□□□□□ -0.14
USB1Q9BQ65 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
USB1Q9BQ65 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.18□□□□□ -0.14
USB1Q9BQ65 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
USB1Q9BQ65 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
USB1Q9BQ65 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.18□□□□□ -0.14
USB1Q9BQ65 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
USB1Q9BQ65 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
USB1Q9BQ65 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
USB1Q9BQ65 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.18□□□□□ -0.14
USB1Q9BQ65 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.18□□□□□ -0.14
USB1Q9BQ65 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
USB1Q9BQ65 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
USB1Q9BQ65 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USB1Q9BQ65 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
USB1Q9BQ65 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USB1Q9BQ65 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
USB1Q9BQ65 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms