Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.03■□□□□ 0.48
ARID3AQ99856 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
ARID3AQ99856 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ARID3AQ99856 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 AL353732.1-201ENST00000569618 1459 ntBASIC18.03■□□□□ 0.48
ARID3AQ99856 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ARID3AQ99856 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.03■□□□□ 0.48
ARID3AQ99856 AP002490.2-201ENST00000524791 560 ntBASIC18.03■□□□□ 0.48
ARID3AQ99856 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.03■□□□□ 0.48
ARID3AQ99856 AC106730.1-201ENST00000566722 1090 ntBASIC18.03■□□□□ 0.48
ARID3AQ99856 AC005412.3-201ENST00000580309 715 ntBASIC18.03■□□□□ 0.48
ARID3AQ99856 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.03■□□□□ 0.48
ARID3AQ99856 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARID3AQ99856 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC18.03■□□□□ 0.48
ARID3AQ99856 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 AL596087.1-201ENST00000400979 1969 ntBASIC18.02■□□□□ 0.48
ARID3AQ99856 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ARID3AQ99856 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ARID3AQ99856 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ARID3AQ99856 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.02■□□□□ 0.48
ARID3AQ99856 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.02■□□□□ 0.48
ARID3AQ99856 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC18.02■□□□□ 0.48
ARID3AQ99856 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.02■□□□□ 0.48
ARID3AQ99856 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.02■□□□□ 0.48
ARID3AQ99856 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.02■□□□□ 0.48
ARID3AQ99856 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.02■□□□□ 0.48
ARID3AQ99856 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.02■□□□□ 0.48
ARID3AQ99856 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.02■□□□□ 0.48
ARID3AQ99856 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ARID3AQ99856 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ARID3AQ99856 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
ARID3AQ99856 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ARID3AQ99856 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARID3AQ99856 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ARID3AQ99856 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARID3AQ99856 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARID3AQ99856 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARID3AQ99856 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ARID3AQ99856 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ARID3AQ99856 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARID3AQ99856 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
ARID3AQ99856 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARID3AQ99856 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARID3AQ99856 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARID3AQ99856 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARID3AQ99856 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARID3AQ99856 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.01■□□□□ 0.47
ARID3AQ99856 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARID3AQ99856 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARID3AQ99856 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARID3AQ99856 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARID3AQ99856 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC18.01■□□□□ 0.47
ARID3AQ99856 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.01■□□□□ 0.47
ARID3AQ99856 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARID3AQ99856 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ARID3AQ99856 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms