Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
RFT1Q96AA3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFT1Q96AA3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 MRPL3P1-201ENST00000400109 1033 ntBASIC14.01□□□□□ -0.17
RFT1Q96AA3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 AC009947.1-201ENST00000444350 727 ntBASIC14.01□□□□□ -0.17
RFT1Q96AA3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 AC010507.1-201ENST00000633895 436 ntBASIC14.01□□□□□ -0.17
RFT1Q96AA3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 AC005840.4-201ENST00000541242 2494 ntBASIC14.01□□□□□ -0.17
RFT1Q96AA3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFT1Q96AA3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.01□□□□□ -0.17
RFT1Q96AA3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RFT1Q96AA3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14□□□□□ -0.17
RFT1Q96AA3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RFT1Q96AA3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14□□□□□ -0.17
RFT1Q96AA3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14□□□□□ -0.17
RFT1Q96AA3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14□□□□□ -0.17
RFT1Q96AA3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RFT1Q96AA3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
RFT1Q96AA3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14□□□□□ -0.17
RFT1Q96AA3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14□□□□□ -0.17
RFT1Q96AA3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14□□□□□ -0.17
RFT1Q96AA3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RFT1Q96AA3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 DDT-204ENST00000404092 805 ntTSL 3 BASIC14□□□□□ -0.17
RFT1Q96AA3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14□□□□□ -0.17
RFT1Q96AA3 PMS2P4-201ENST00000412466 1052 ntBASIC14□□□□□ -0.17
RFT1Q96AA3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 AL450487.1-201ENST00000426799 995 ntBASIC14□□□□□ -0.17
RFT1Q96AA3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14□□□□□ -0.17
RFT1Q96AA3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14□□□□□ -0.17
RFT1Q96AA3 RNA5SP415-201ENST00000517246 115 ntBASIC14□□□□□ -0.17
RFT1Q96AA3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RFT1Q96AA3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RFT1Q96AA3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14□□□□□ -0.17
RFT1Q96AA3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14□□□□□ -0.17
RFT1Q96AA3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14□□□□□ -0.17
RFT1Q96AA3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14□□□□□ -0.17
RFT1Q96AA3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RFT1Q96AA3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms