Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.54□□□□□ -0.08
HPS1Q92902 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HPS1Q92902 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HPS1Q92902 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HPS1Q92902 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HPS1Q92902 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HPS1Q92902 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HPS1Q92902 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.54□□□□□ -0.08
HPS1Q92902 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HPS1Q92902 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HPS1Q92902 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HPS1Q92902 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HPS1Q92902 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HPS1Q92902 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HPS1Q92902 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HPS1Q92902 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.53□□□□□ -0.08
HPS1Q92902 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HPS1Q92902 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.53□□□□□ -0.08
HPS1Q92902 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HPS1Q92902 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.53□□□□□ -0.08
HPS1Q92902 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
HPS1Q92902 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HPS1Q92902 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.53□□□□□ -0.08
HPS1Q92902 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HPS1Q92902 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.53□□□□□ -0.08
HPS1Q92902 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.53□□□□□ -0.08
HPS1Q92902 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
HPS1Q92902 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.53□□□□□ -0.08
HPS1Q92902 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.53□□□□□ -0.08
HPS1Q92902 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.53□□□□□ -0.08
HPS1Q92902 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
HPS1Q92902 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.53□□□□□ -0.08
HPS1Q92902 AC004967.1-201ENST00000453589 447 ntBASIC14.53□□□□□ -0.08
HPS1Q92902 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.53□□□□□ -0.08
HPS1Q92902 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
HPS1Q92902 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.53□□□□□ -0.08
HPS1Q92902 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.53□□□□□ -0.08
HPS1Q92902 AL158211.2-201ENST00000607282 395 ntBASIC14.53□□□□□ -0.08
HPS1Q92902 AC008667.4-201ENST00000607370 168 ntBASIC14.53□□□□□ -0.08
HPS1Q92902 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 AC055717.3-201ENST00000622967 595 ntBASIC14.53□□□□□ -0.08
HPS1Q92902 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
HPS1Q92902 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HPS1Q92902 AC006504.5-208ENST00000588784 2401 ntBASIC14.53□□□□□ -0.08
HPS1Q92902 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.53□□□□□ -0.08
HPS1Q92902 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HPS1Q92902 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HPS1Q92902 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
HPS1Q92902 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HPS1Q92902 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
HPS1Q92902 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HPS1Q92902 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HPS1Q92902 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.52□□□□□ -0.08
HPS1Q92902 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.52□□□□□ -0.08
HPS1Q92902 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HPS1Q92902 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HPS1Q92902 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HPS1Q92902 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
HPS1Q92902 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HPS1Q92902 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.52□□□□□ -0.08
HPS1Q92902 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
HPS1Q92902 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
HPS1Q92902 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.52□□□□□ -0.08
HPS1Q92902 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.52□□□□□ -0.08
HPS1Q92902 CICP17-201ENST00000418553 2377 ntBASIC14.52□□□□□ -0.08
HPS1Q92902 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HPS1Q92902 AC002310.6-201ENST00000624451 1377 ntBASIC14.52□□□□□ -0.08
HPS1Q92902 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
HPS1Q92902 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HPS1Q92902 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HPS1Q92902 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HPS1Q92902 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 MCCD1P2-201ENST00000423228 335 ntBASIC14.52□□□□□ -0.09
HPS1Q92902 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.52□□□□□ -0.09
HPS1Q92902 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HPS1Q92902 AL603841.1-201ENST00000430516 664 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms