Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AC018529.1-201ENST00000613063 361 ntBASIC16.2■□□□□ 0.18
SCG3Q8WXD2 AL390754.1-201ENST00000619088 582 ntBASIC16.2■□□□□ 0.18
SCG3Q8WXD2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 FO538757.1-201ENST00000623083 1397 ntBASIC16.2■□□□□ 0.18
SCG3Q8WXD2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.2■□□□□ 0.18
SCG3Q8WXD2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.2■□□□□ 0.18
SCG3Q8WXD2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AC011477.6-201ENST00000604980 1927 ntBASIC16.19■□□□□ 0.18
SCG3Q8WXD2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AC104581.4-201ENST00000623126 3052 ntBASIC16.19■□□□□ 0.18
SCG3Q8WXD2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AP001282.1-201ENST00000531301 1499 ntBASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 RARRES2P9-201ENST00000565168 469 ntBASIC16.19■□□□□ 0.18
SCG3Q8WXD2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AC024267.1-201ENST00000582320 895 ntBASIC16.19■□□□□ 0.18
SCG3Q8WXD2 MIR4453-201ENST00000584019 89 ntBASIC16.19■□□□□ 0.18
SCG3Q8WXD2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AC003101.2-201ENST00000612557 442 ntBASIC16.19■□□□□ 0.18
SCG3Q8WXD2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 CICP4-201ENST00000447359 2812 ntBASIC16.19■□□□□ 0.18
SCG3Q8WXD2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 PPT1-215ENST00000641471 2368 ntBASIC16.19■□□□□ 0.18
SCG3Q8WXD2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCG3Q8WXD2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCG3Q8WXD2 COX20P2-201ENST00000452636 358 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms