Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 INE1-201ENST00000456273 945 ntBASIC14.05□□□□□ -0.16
RNF138Q8WVD3 RN7SL752P-201ENST00000463779 287 ntBASIC14.05□□□□□ -0.16
RNF138Q8WVD3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 AC011495.1-201ENST00000498085 584 ntBASIC14.05□□□□□ -0.16
RNF138Q8WVD3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 BX539320.1-201ENST00000623759 877 ntBASIC14.05□□□□□ -0.16
RNF138Q8WVD3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 REXO1L4P-201ENST00000605109 1937 ntBASIC14.05□□□□□ -0.16
RNF138Q8WVD3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 AC104640.1-201ENST00000562617 2109 ntBASIC14.05□□□□□ -0.16
RNF138Q8WVD3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF138Q8WVD3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 AC023024.2-201ENST00000623561 1993 ntBASIC14.04□□□□□ -0.16
RNF138Q8WVD3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 AL512384.1-201ENST00000406683 331 ntBASIC14.04□□□□□ -0.16
RNF138Q8WVD3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 HLA-K-203ENST00000430151 1046 ntBASIC14.04□□□□□ -0.16
RNF138Q8WVD3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 AC010319.3-201ENST00000597028 470 ntBASIC14.04□□□□□ -0.16
RNF138Q8WVD3 AP005019.2-201ENST00000615104 511 ntBASIC14.04□□□□□ -0.16
RNF138Q8WVD3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 AC006486.2-201ENST00000624246 2199 ntBASIC14.04□□□□□ -0.16
RNF138Q8WVD3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 CICP6-201ENST00000457191 2729 ntBASIC14.04□□□□□ -0.16
RNF138Q8WVD3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF138Q8WVD3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF138Q8WVD3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
RNF138Q8WVD3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF138Q8WVD3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RNF138Q8WVD3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF138Q8WVD3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF138Q8WVD3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF138Q8WVD3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms