Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 AC005052.1-201ENST00000625181 2492 ntBASIC13□□□□□ -0.33
CCDC168Q8NDH2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 AC007787.1-201ENST00000588095 1583 ntBASIC13□□□□□ -0.33
CCDC168Q8NDH2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 AC019193.1-201ENST00000506678 823 ntBASIC13□□□□□ -0.33
CCDC168Q8NDH2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 MIR6842-201ENST00000612539 65 ntBASIC13□□□□□ -0.33
CCDC168Q8NDH2 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 AC068587.8-201ENST00000641239 219 ntBASIC13□□□□□ -0.33
CCDC168Q8NDH2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC168Q8NDH2 GGT3P-204ENST00000453783 1664 ntBASIC13□□□□□ -0.33
CCDC168Q8NDH2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13□□□□□ -0.33
CCDC168Q8NDH2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 FAM8A4P-201ENST00000435433 1213 ntBASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 PPOX-204ENST00000462866 473 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 AL136309.1-201ENST00000403917 691 ntBASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 AP003171.2-201ENST00000528208 925 ntBASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 RN7SL713P-201ENST00000582127 302 ntBASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 ETV2-207ENST00000619399 994 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms