Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.46□□□□□ -0.1
LSMEM1Q8N8F7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
LSMEM1Q8N8F7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LSMEM1Q8N8F7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LSMEM1Q8N8F7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LSMEM1Q8N8F7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LSMEM1Q8N8F7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LSMEM1Q8N8F7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LSMEM1Q8N8F7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LSMEM1Q8N8F7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 AC112693.3-201ENST00000624819 1983 ntBASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 AP001059.3-201ENST00000619053 235 ntBASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LSMEM1Q8N8F7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 SPDYE7P-202ENST00000420373 878 ntBASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 HIST3H2BA-201ENST00000436555 524 ntBASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 AP006288.1-201ENST00000446065 395 ntBASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 AL512356.2-201ENST00000546955 174 ntBASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 AC003101.2-201ENST00000612557 442 ntBASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.44□□□□□ -0.1
LSMEM1Q8N8F7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms