Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 MIR7845-201ENST00000618396 99 ntBASIC12.33□□□□□ -0.44
C3orf56Q8N813 AC138951.2-201ENST00000623455 1161 ntBASIC12.33□□□□□ -0.44
C3orf56Q8N813 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 PCDHA1-201ENST00000378133 2726 ntBASIC12.33□□□□□ -0.44
C3orf56Q8N813 MSTO2P-201ENST00000314835 1709 ntBASIC12.33□□□□□ -0.44
C3orf56Q8N813 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.33□□□□□ -0.44
C3orf56Q8N813 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
C3orf56Q8N813 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 MIR600HG-201ENST00000449175 5984 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 AC005622.1-201ENST00000636801 1703 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 KRT8P37-201ENST00000451609 1420 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 CNN2P8-201ENST00000421872 913 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 AL133466.1-201ENST00000447582 150 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 AL591846.1-201ENST00000451736 433 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 TMEM198B-204ENST00000484016 896 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 AC105129.2-201ENST00000559536 390 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 AC243562.2-201ENST00000561247 970 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 AP006547.1-201ENST00000563435 692 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 MIR4722-201ENST00000578292 60 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 EEF1DP1-201ENST00000585891 896 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 AL353726.2-201ENST00000623259 884 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 AC005252.2-201ENST00000624630 1141 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
C3orf56Q8N813 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 PCDHB17P-201ENST00000539533 2393 ntBASIC12.32□□□□□ -0.44
C3orf56Q8N813 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
C3orf56Q8N813 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
C3orf56Q8N813 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.31□□□□□ -0.44
C3orf56Q8N813 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms