Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.09■□□□□ 0.33
VPS52Q8N1B4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 AC092552.1-201ENST00000547243 906 ntBASIC17.09■□□□□ 0.33
VPS52Q8N1B4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 AC008735.3-201ENST00000596646 500 ntBASIC17.09■□□□□ 0.33
VPS52Q8N1B4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 MTHFR-217ENST00000641820 1569 ntBASIC17.09■□□□□ 0.33
VPS52Q8N1B4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 Z97205.2-201ENST00000564697 1639 ntBASIC17.09■□□□□ 0.33
VPS52Q8N1B4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 AC022188.1-201ENST00000620960 1664 ntBASIC17.09■□□□□ 0.33
VPS52Q8N1B4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS52Q8N1B4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.08■□□□□ 0.33
VPS52Q8N1B4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 AC022494.1-201ENST00000466044 728 ntBASIC17.08■□□□□ 0.32
VPS52Q8N1B4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 MIR4259-201ENST00000584466 101 ntBASIC17.08■□□□□ 0.32
VPS52Q8N1B4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 LINC01115-203ENST00000606068 577 ntBASIC17.08■□□□□ 0.32
VPS52Q8N1B4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS52Q8N1B4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms