Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.11■□□□□ 0.17
SIX5Q8N196 AC017007.3-201ENST00000479865 435 ntBASIC16.11■□□□□ 0.17
SIX5Q8N196 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SIX5Q8N196 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.11■□□□□ 0.17
SIX5Q8N196 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX5Q8N196 AC025279.2-201ENST00000569730 653 ntBASIC16.11■□□□□ 0.17
SIX5Q8N196 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.11■□□□□ 0.17
SIX5Q8N196 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.11■□□□□ 0.17
SIX5Q8N196 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.11■□□□□ 0.17
SIX5Q8N196 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.11■□□□□ 0.17
SIX5Q8N196 AC138951.2-201ENST00000623455 1161 ntBASIC16.11■□□□□ 0.17
SIX5Q8N196 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.11■□□□□ 0.17
SIX5Q8N196 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.11■□□□□ 0.17
SIX5Q8N196 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
SIX5Q8N196 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX5Q8N196 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
SIX5Q8N196 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SIX5Q8N196 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX5Q8N196 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SIX5Q8N196 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.1■□□□□ 0.17
SIX5Q8N196 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.1■□□□□ 0.17
SIX5Q8N196 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SIX5Q8N196 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.1■□□□□ 0.17
SIX5Q8N196 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.1■□□□□ 0.17
SIX5Q8N196 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SIX5Q8N196 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SIX5Q8N196 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.1■□□□□ 0.17
SIX5Q8N196 FXNP2-201ENST00000411625 547 ntBASIC16.1■□□□□ 0.17
SIX5Q8N196 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.1■□□□□ 0.17
SIX5Q8N196 FAM197Y7-201ENST00000432892 766 ntBASIC16.1■□□□□ 0.17
SIX5Q8N196 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.1■□□□□ 0.17
SIX5Q8N196 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.1■□□□□ 0.17
SIX5Q8N196 UPF3AP2-201ENST00000457924 1132 ntBASIC16.1■□□□□ 0.17
SIX5Q8N196 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.1■□□□□ 0.17
SIX5Q8N196 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.1■□□□□ 0.17
SIX5Q8N196 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.1■□□□□ 0.17
SIX5Q8N196 AC105129.2-201ENST00000559536 390 ntBASIC16.1■□□□□ 0.17
SIX5Q8N196 AP006547.1-201ENST00000563435 692 ntBASIC16.1■□□□□ 0.17
SIX5Q8N196 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.1■□□□□ 0.17
SIX5Q8N196 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SIX5Q8N196 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.1■□□□□ 0.17
SIX5Q8N196 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SIX5Q8N196 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 AC020914.3-201ENST00000594712 304 ntBASIC16.1■□□□□ 0.17
SIX5Q8N196 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.1■□□□□ 0.17
SIX5Q8N196 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SIX5Q8N196 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.1■□□□□ 0.17
SIX5Q8N196 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.1■□□□□ 0.17
SIX5Q8N196 AHCYP2-201ENST00000430630 1300 ntBASIC16.1■□□□□ 0.17
SIX5Q8N196 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SIX5Q8N196 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX5Q8N196 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
SIX5Q8N196 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.1■□□□□ 0.17
SIX5Q8N196 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.1■□□□□ 0.17
SIX5Q8N196 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.09■□□□□ 0.17
SIX5Q8N196 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.09■□□□□ 0.17
SIX5Q8N196 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIX5Q8N196 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.09■□□□□ 0.17
SIX5Q8N196 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIX5Q8N196 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SIX5Q8N196 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SIX5Q8N196 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.09■□□□□ 0.17
SIX5Q8N196 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SIX5Q8N196 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIX5Q8N196 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.09■□□□□ 0.17
SIX5Q8N196 AC006001.1-201ENST00000325130 474 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms