Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 REXO1L8P-201ENST00000604378 1897 ntBASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 BTBD6P1-201ENST00000412176 1267 ntBASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 ACTG1P3-201ENST00000431775 1114 ntBASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 ACTG1P17-201ENST00000558391 1119 ntBASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 CYP4F24P-201ENST00000586049 1580 ntBASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RP1L1Q8IWN7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 AC104457.1-201ENST00000401024 814 ntBASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 EEF1DP4-201ENST00000446006 880 ntBASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 AP001258.2-201ENST00000529891 490 ntBASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 NDUFV2P1-201ENST00000596415 907 ntBASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 Z93015.1-201ENST00000451718 390 ntBASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 SCARNA20.5-201ENST00000516991 142 ntBASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 AC104982.3-201ENST00000581995 514 ntBASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 AC138951.2-201ENST00000623455 1161 ntBASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 LETM1P2-201ENST00000597330 2178 ntBASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RP1L1Q8IWN7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RP1L1Q8IWN7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
RP1L1Q8IWN7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RP1L1Q8IWN7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RP1L1Q8IWN7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RP1L1Q8IWN7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms