Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 WASH6P-202ENST00000359512 1437 ntBASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 AC087163.2-201ENST00000457299 853 ntBASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 TPSP2-201ENST00000561760 610 ntBASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LYSMD2Q8IV50 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 AC127383.1-201ENST00000444697 1800 ntBASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD2Q8IV50 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms