Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM50Q86XT4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 KRT43P-201ENST00000434019 910 ntBASIC17.48■□□□□ 0.39
TRIM50Q86XT4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 BNIP3P42-201ENST00000454982 569 ntBASIC17.48■□□□□ 0.39
TRIM50Q86XT4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 BNIP3P29-201ENST00000598302 571 ntBASIC17.48■□□□□ 0.39
TRIM50Q86XT4 AC133552.6-201ENST00000613406 534 ntBASIC17.48■□□□□ 0.39
TRIM50Q86XT4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 AC011447.5-201ENST00000616168 564 ntBASIC17.48■□□□□ 0.39
TRIM50Q86XT4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM50Q86XT4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 CTBP2P5-201ENST00000454986 1264 ntBASIC17.47■□□□□ 0.39
TRIM50Q86XT4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 AC104989.1-201ENST00000519711 778 ntBASIC17.47■□□□□ 0.39
TRIM50Q86XT4 AP001889.1-201ENST00000525414 633 ntBASIC17.47■□□□□ 0.39
TRIM50Q86XT4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 AL033527.4-201ENST00000641026 673 ntBASIC17.47■□□□□ 0.39
TRIM50Q86XT4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM50Q86XT4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms