Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 AC132872.4-202ENST00000622924 2756 ntBASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 AC098614.1-201ENST00000368528 745 ntBASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 AP006294.1-201ENST00000415407 339 ntBASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 AC098850.1-201ENST00000419919 790 ntBASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 ELK1P1-201ENST00000485699 580 ntBASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 TMEM261P1-201ENST00000604899 340 ntBASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 MIR8072-201ENST00000614241 80 ntBASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRTM4Q86VH4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 FLJ16779-201ENST00000612722 7638 ntBASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 RPL13AP25-201ENST00000484130 612 ntBASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 AC005225.4-201ENST00000557330 545 ntBASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 AL596325.1-201ENST00000563991 1082 ntBASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 CICP13-201ENST00000422015 2789 ntBASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 AC127383.1-201ENST00000444697 1800 ntBASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRRTM4Q86VH4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms