Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 AC126177.1-201ENST00000547829 2218 ntBASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PDSS1Q5T2R2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 BNIP3P1-202ENST00000550043 1585 ntBASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 AJ011932.1-201ENST00000621707 465 ntBASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 FAM45BP-202ENST00000592932 1624 ntBASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.36□□□□□ -0.11
PDSS1Q5T2R2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms