Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM1Q15032 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM1Q15032 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM1Q15032 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM1Q15032 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM1Q15032 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM1Q15032 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM1Q15032 AL583805.1-201ENST00000391389 531 ntBASIC19.35■□□□□ 0.69
R3HDM1Q15032 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 MIR3180-2-201ENST00000581748 88 ntBASIC19.35■□□□□ 0.69
R3HDM1Q15032 AL139339.2-201ENST00000608063 657 ntBASIC19.35■□□□□ 0.69
R3HDM1Q15032 AC138466.5-201ENST00000624002 808 ntBASIC19.35■□□□□ 0.69
R3HDM1Q15032 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM1Q15032 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM1Q15032 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM1Q15032 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
R3HDM1Q15032 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 KRT8P21-201ENST00000430398 1491 ntBASIC19.35■□□□□ 0.69
R3HDM1Q15032 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.35■□□□□ 0.69
R3HDM1Q15032 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.34■□□□□ 0.69
R3HDM1Q15032 E2F3P2-201ENST00000447755 1422 ntBASIC19.34■□□□□ 0.69
R3HDM1Q15032 AC018892.3-201ENST00000623986 2499 ntBASIC19.34■□□□□ 0.69
R3HDM1Q15032 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.34■□□□□ 0.69
R3HDM1Q15032 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM1Q15032 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC19.34■□□□□ 0.69
R3HDM1Q15032 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.34■□□□□ 0.69
R3HDM1Q15032 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM1Q15032 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC19.34■□□□□ 0.69
R3HDM1Q15032 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC19.34■□□□□ 0.69
R3HDM1Q15032 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.34■□□□□ 0.69
R3HDM1Q15032 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM1Q15032 MIR6769A-201ENST00000617340 73 ntBASIC19.34■□□□□ 0.69
R3HDM1Q15032 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.34■□□□□ 0.69
R3HDM1Q15032 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.34■□□□□ 0.69
R3HDM1Q15032 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
R3HDM1Q15032 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
R3HDM1Q15032 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
R3HDM1Q15032 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM1Q15032 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM1Q15032 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM1Q15032 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HDM1Q15032 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.33■□□□□ 0.69
R3HDM1Q15032 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
R3HDM1Q15032 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.33■□□□□ 0.69
R3HDM1Q15032 CLUHP2-201ENST00000426660 1303 ntBASIC19.33■□□□□ 0.69
R3HDM1Q15032 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
R3HDM1Q15032 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
R3HDM1Q15032 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
R3HDM1Q15032 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 GCSHP3-201ENST00000431120 391 ntBASIC19.33■□□□□ 0.68
R3HDM1Q15032 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 AP000358.1-201ENST00000456260 156 ntBASIC19.33■□□□□ 0.68
R3HDM1Q15032 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
R3HDM1Q15032 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
R3HDM1Q15032 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
R3HDM1Q15032 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM1Q15032 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.32■□□□□ 0.68
R3HDM1Q15032 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM1Q15032 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM1Q15032 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM1Q15032 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM1Q15032 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
R3HDM1Q15032 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM1Q15032 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM1Q15032 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
R3HDM1Q15032 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM1Q15032 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM1Q15032 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM1Q15032 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC19.32■□□□□ 0.68
R3HDM1Q15032 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HDM1Q15032 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.32■□□□□ 0.68
R3HDM1Q15032 AC093909.3-201ENST00000504783 336 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms