Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.13□□□□□ -0.47
HIST1H1AQ02539 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
HIST1H1AQ02539 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1AQ02539 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.13□□□□□ -0.47
HIST1H1AQ02539 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST1H1AQ02539 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 AC020658.6-201ENST00000623564 1870 ntBASIC12.12□□□□□ -0.47
HIST1H1AQ02539 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 AC005252.3-201ENST00000623855 2258 ntBASIC12.12□□□□□ -0.47
HIST1H1AQ02539 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 MED15P5-201ENST00000423150 992 ntBASIC12.12□□□□□ -0.47
HIST1H1AQ02539 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 KRT18P2-201ENST00000447938 1258 ntBASIC12.12□□□□□ -0.47
HIST1H1AQ02539 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 PDPK2P-202ENST00000562415 1191 ntBASIC12.12□□□□□ -0.47
HIST1H1AQ02539 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 AC120114.3-201ENST00000611923 658 ntBASIC12.12□□□□□ -0.47
HIST1H1AQ02539 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST1H1AQ02539 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AC015656.1-201ENST00000624209 3578 ntBASIC12.11□□□□□ -0.47
HIST1H1AQ02539 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AC008677.1-201ENST00000519230 1561 ntBASIC12.11□□□□□ -0.47
HIST1H1AQ02539 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms