Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.06■□□□□ 0.32
GTF2BQ00403 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 DRD5P1-201ENST00000456605 1438 ntBASIC17.06■□□□□ 0.32
GTF2BQ00403 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GTF2BQ00403 KRT8P44-201ENST00000441609 1350 ntBASIC17.06■□□□□ 0.32
GTF2BQ00403 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GTF2BQ00403 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GTF2BQ00403 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.06■□□□□ 0.32
GTF2BQ00403 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.06■□□□□ 0.32
GTF2BQ00403 MYCLP2-201ENST00000449268 967 ntBASIC17.06■□□□□ 0.32
GTF2BQ00403 AC104596.2-201ENST00000512793 793 ntBASIC17.06■□□□□ 0.32
GTF2BQ00403 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.06■□□□□ 0.32
GTF2BQ00403 AC092552.1-201ENST00000547243 906 ntBASIC17.06■□□□□ 0.32
GTF2BQ00403 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.06■□□□□ 0.32
GTF2BQ00403 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
GTF2BQ00403 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.06■□□□□ 0.32
GTF2BQ00403 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GTF2BQ00403 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GTF2BQ00403 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GTF2BQ00403 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.06■□□□□ 0.32
GTF2BQ00403 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2BQ00403 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.06■□□□□ 0.32
GTF2BQ00403 AL162727.3-201ENST00000635661 2787 ntBASIC17.06■□□□□ 0.32
GTF2BQ00403 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2BQ00403 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.05■□□□□ 0.32
GTF2BQ00403 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
GTF2BQ00403 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GTF2BQ00403 AC073347.1-201ENST00000421633 2643 ntBASIC17.05■□□□□ 0.32
GTF2BQ00403 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2BQ00403 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GTF2BQ00403 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.05■□□□□ 0.32
GTF2BQ00403 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2BQ00403 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.05■□□□□ 0.32
GTF2BQ00403 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GTF2BQ00403 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2BQ00403 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2BQ00403 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.05■□□□□ 0.32
GTF2BQ00403 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
GTF2BQ00403 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
GTF2BQ00403 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2BQ00403 AL442647.2-201ENST00000429864 857 ntBASIC17.05■□□□□ 0.32
GTF2BQ00403 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.05■□□□□ 0.32
GTF2BQ00403 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.05■□□□□ 0.32
GTF2BQ00403 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.05■□□□□ 0.32
GTF2BQ00403 ELK1P1-201ENST00000485699 580 ntBASIC17.05■□□□□ 0.32
GTF2BQ00403 AC026410.3-201ENST00000514280 936 ntBASIC17.05■□□□□ 0.32
GTF2BQ00403 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.05■□□□□ 0.32
GTF2BQ00403 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
GTF2BQ00403 AL049840.4-201ENST00000602422 811 ntBASIC17.05■□□□□ 0.32
GTF2BQ00403 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.05■□□□□ 0.32
GTF2BQ00403 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
GTF2BQ00403 AC007431.3-201ENST00000623221 587 ntBASIC17.05■□□□□ 0.32
GTF2BQ00403 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2BQ00403 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.05■□□□□ 0.32
GTF2BQ00403 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2BQ00403 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2BQ00403 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
GTF2BQ00403 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2BQ00403 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.05■□□□□ 0.32
GTF2BQ00403 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.05■□□□□ 0.32
GTF2BQ00403 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GTF2BQ00403 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GTF2BQ00403 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2BQ00403 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2BQ00403 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.04■□□□□ 0.32
GTF2BQ00403 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.04■□□□□ 0.32
GTF2BQ00403 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2BQ00403 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
GTF2BQ00403 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2BQ00403 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2BQ00403 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.04■□□□□ 0.32
GTF2BQ00403 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.04■□□□□ 0.32
GTF2BQ00403 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.04■□□□□ 0.32
GTF2BQ00403 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.04■□□□□ 0.32
GTF2BQ00403 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2BQ00403 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2BQ00403 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GTF2BQ00403 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2BQ00403 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2BQ00403 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.04■□□□□ 0.32
GTF2BQ00403 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms