Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.47■□□□□ 0.23
CBX1P83916 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CBX1P83916 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX1P83916 AC023090.2-201ENST00000625182 2110 ntBASIC16.46■□□□□ 0.23
CBX1P83916 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CBX1P83916 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX1P83916 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CBX1P83916 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC16.46■□□□□ 0.23
CBX1P83916 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CBX1P83916 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CBX1P83916 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CBX1P83916 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CBX1P83916 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CBX1P83916 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.46■□□□□ 0.23
CBX1P83916 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.46■□□□□ 0.23
CBX1P83916 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 NUDT16P1-203ENST00000513809 620 ntBASIC16.46■□□□□ 0.23
CBX1P83916 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.46■□□□□ 0.23
CBX1P83916 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX1P83916 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.46■□□□□ 0.23
CBX1P83916 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.46■□□□□ 0.23
CBX1P83916 AC006058.3-201ENST00000606217 1069 ntBASIC16.46■□□□□ 0.23
CBX1P83916 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.46■□□□□ 0.23
CBX1P83916 AC092865.7-201ENST00000641832 219 ntBASIC16.46■□□□□ 0.23
CBX1P83916 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.46■□□□□ 0.23
CBX1P83916 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC16.46■□□□□ 0.23
CBX1P83916 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CBX1P83916 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CBX1P83916 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CBX1P83916 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
CBX1P83916 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CBX1P83916 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CBX1P83916 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.46■□□□□ 0.22
CBX1P83916 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CBX1P83916 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 AC018529.2-202ENST00000611482 3087 ntBASIC16.45■□□□□ 0.22
CBX1P83916 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CBX1P83916 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
CBX1P83916 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CBX1P83916 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 AL023803.3-201ENST00000615559 522 ntBASIC16.45■□□□□ 0.22
CBX1P83916 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 ACE3P-201ENST00000423435 1973 ntBASIC16.45■□□□□ 0.22
CBX1P83916 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC16.45■□□□□ 0.22
CBX1P83916 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 AL731571.1-201ENST00000617058 5428 ntBASIC16.45■□□□□ 0.22
CBX1P83916 AL365181.3-201ENST00000605886 3222 ntBASIC16.45■□□□□ 0.22
CBX1P83916 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CBX1P83916 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC16.45■□□□□ 0.22
CBX1P83916 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CBX1P83916 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CBX1P83916 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms