Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRAMEP78395 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PRAMEP78395 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRAMEP78395 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.93■□□□□ 0.14
PRAMEP78395 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.93■□□□□ 0.14
PRAMEP78395 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRAMEP78395 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRAMEP78395 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.93■□□□□ 0.14
PRAMEP78395 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.93■□□□□ 0.14
PRAMEP78395 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRAMEP78395 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRAMEP78395 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRAMEP78395 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PRAMEP78395 AC087481.3-201ENST00000602886 1894 ntBASIC15.93■□□□□ 0.14
PRAMEP78395 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRAMEP78395 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PRAMEP78395 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.93■□□□□ 0.14
PRAMEP78395 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRAMEP78395 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
PRAMEP78395 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PRAMEP78395 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEP78395 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PRAMEP78395 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PRAMEP78395 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PRAMEP78395 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEP78395 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.92■□□□□ 0.14
PRAMEP78395 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.92■□□□□ 0.14
PRAMEP78395 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PRAMEP78395 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEP78395 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEP78395 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.92■□□□□ 0.14
PRAMEP78395 BANF1P1-201ENST00000553684 263 ntBASIC15.92■□□□□ 0.14
PRAMEP78395 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 MIR4313-201ENST00000580760 101 ntBASIC15.92■□□□□ 0.14
PRAMEP78395 MIR4453-201ENST00000584019 89 ntBASIC15.92■□□□□ 0.14
PRAMEP78395 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEP78395 RN7SL828P-201ENST00000607615 303 ntBASIC15.92■□□□□ 0.14
PRAMEP78395 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEP78395 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.92■□□□□ 0.14
PRAMEP78395 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEP78395 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEP78395 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.92■□□□□ 0.14
PRAMEP78395 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.92■□□□□ 0.14
PRAMEP78395 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.92■□□□□ 0.14
PRAMEP78395 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.92■□□□□ 0.14
PRAMEP78395 SSR4P1-203ENST00000599569 2260 ntBASIC15.92■□□□□ 0.14
PRAMEP78395 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRAMEP78395 AC136621.1-201ENST00000624017 2304 ntBASIC15.91■□□□□ 0.14
PRAMEP78395 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PRAMEP78395 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.91■□□□□ 0.14
PRAMEP78395 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.91■□□□□ 0.14
PRAMEP78395 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PRAMEP78395 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.91■□□□□ 0.14
PRAMEP78395 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.91■□□□□ 0.14
PRAMEP78395 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PRAMEP78395 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PRAMEP78395 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PRAMEP78395 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.91■□□□□ 0.14
PRAMEP78395 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.91■□□□□ 0.14
PRAMEP78395 DNAJB3-202ENST00000449667 1266 ntBASIC15.91■□□□□ 0.14
PRAMEP78395 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.91■□□□□ 0.14
PRAMEP78395 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.91■□□□□ 0.14
PRAMEP78395 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
PRAMEP78395 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
PRAMEP78395 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.91■□□□□ 0.14
PRAMEP78395 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.91■□□□□ 0.14
PRAMEP78395 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms