Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.09□□□□□ -0.15
CLRN1P58418 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.09□□□□□ -0.15
CLRN1P58418 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.09□□□□□ -0.15
CLRN1P58418 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLRN1P58418 AL079307.3-201ENST00000556114 283 ntBASIC14.09□□□□□ -0.15
CLRN1P58418 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 SSR4P1-203ENST00000599569 2260 ntBASIC14.09□□□□□ -0.15
CLRN1P58418 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 OR2I1P-210ENST00000642037 4691 ntBASIC14.09□□□□□ -0.15
CLRN1P58418 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 AC136621.1-201ENST00000624017 2304 ntBASIC14.09□□□□□ -0.15
CLRN1P58418 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.09□□□□□ -0.15
CLRN1P58418 TMBIM7P-203ENST00000641617 1718 ntBASIC14.09□□□□□ -0.15
CLRN1P58418 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CLRN1P58418 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.09□□□□□ -0.15
CLRN1P58418 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 KRT8P12-202ENST00000472924 1397 ntBASIC14.09□□□□□ -0.15
CLRN1P58418 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLRN1P58418 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CLRN1P58418 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLRN1P58418 AC092384.3-202ENST00000564646 2873 ntBASIC14.08□□□□□ -0.15
CLRN1P58418 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CLRN1P58418 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.08□□□□□ -0.15
CLRN1P58418 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.08□□□□□ -0.15
CLRN1P58418 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CLRN1P58418 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CLRN1P58418 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLRN1P58418 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CLRN1P58418 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.08□□□□□ -0.15
CLRN1P58418 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.08□□□□□ -0.16
CLRN1P58418 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.08□□□□□ -0.16
CLRN1P58418 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CLRN1P58418 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CLRN1P58418 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CLRN1P58418 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.08□□□□□ -0.16
CLRN1P58418 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 SERBP1P3-201ENST00000459980 809 ntBASIC14.08□□□□□ -0.16
CLRN1P58418 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.08□□□□□ -0.16
CLRN1P58418 HNRNPUP1-201ENST00000554987 333 ntBASIC14.08□□□□□ -0.16
CLRN1P58418 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.08□□□□□ -0.16
CLRN1P58418 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.08□□□□□ -0.16
CLRN1P58418 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.08□□□□□ -0.16
CLRN1P58418 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.08□□□□□ -0.16
CLRN1P58418 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.08□□□□□ -0.16
CLRN1P58418 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.08□□□□□ -0.16
CLRN1P58418 Z92544.3-201ENST00000624747 417 ntBASIC14.08□□□□□ -0.16
CLRN1P58418 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
CLRN1P58418 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLRN1P58418 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.08□□□□□ -0.16
CLRN1P58418 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.08□□□□□ -0.16
CLRN1P58418 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLRN1P58418 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.08□□□□□ -0.16
CLRN1P58418 AC105250.1-201ENST00000509378 2057 ntBASIC14.08□□□□□ -0.16
CLRN1P58418 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CLRN1P58418 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.08□□□□□ -0.16
CLRN1P58418 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLRN1P58418 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.08□□□□□ -0.16
CLRN1P58418 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.08□□□□□ -0.16
CLRN1P58418 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.08□□□□□ -0.16
CLRN1P58418 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLRN1P58418 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLRN1P58418 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLRN1P58418 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLRN1P58418 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLRN1P58418 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLRN1P58418 AC022532.1-201ENST00000624563 1728 ntBASIC14.07□□□□□ -0.16
CLRN1P58418 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLRN1P58418 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CLRN1P58418 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLRN1P58418 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms