Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.74□□□□□ -0.21
FOXG1P55316 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
FOXG1P55316 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
FOXG1P55316 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.74□□□□□ -0.21
FOXG1P55316 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
FOXG1P55316 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.74□□□□□ -0.21
FOXG1P55316 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
FOXG1P55316 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.74□□□□□ -0.21
FOXG1P55316 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.74□□□□□ -0.21
FOXG1P55316 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
FOXG1P55316 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.74□□□□□ -0.21
FOXG1P55316 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
FOXG1P55316 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.73□□□□□ -0.21
FOXG1P55316 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.73□□□□□ -0.21
FOXG1P55316 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.73□□□□□ -0.21
FOXG1P55316 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.73□□□□□ -0.21
FOXG1P55316 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.73□□□□□ -0.21
FOXG1P55316 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.73□□□□□ -0.21
FOXG1P55316 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
FOXG1P55316 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
FOXG1P55316 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.73□□□□□ -0.21
FOXG1P55316 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.73□□□□□ -0.21
FOXG1P55316 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.73□□□□□ -0.21
FOXG1P55316 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.73□□□□□ -0.21
FOXG1P55316 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.73□□□□□ -0.21
FOXG1P55316 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.73□□□□□ -0.21
FOXG1P55316 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.73□□□□□ -0.21
FOXG1P55316 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.73□□□□□ -0.21
FOXG1P55316 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
FOXG1P55316 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.73□□□□□ -0.21
FOXG1P55316 RRP7BP-205ENST00000566851 833 ntBASIC13.73□□□□□ -0.21
FOXG1P55316 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.73□□□□□ -0.21
FOXG1P55316 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.73□□□□□ -0.21
FOXG1P55316 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
FOXG1P55316 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.73□□□□□ -0.21
FOXG1P55316 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.73□□□□□ -0.21
FOXG1P55316 WFDC1-204ENST00000613603 549 ntBASIC13.73□□□□□ -0.21
FOXG1P55316 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
FOXG1P55316 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
FOXG1P55316 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.73□□□□□ -0.21
FOXG1P55316 AC136621.1-201ENST00000624017 2304 ntBASIC13.73□□□□□ -0.21
FOXG1P55316 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
FOXG1P55316 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
FOXG1P55316 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
FOXG1P55316 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
FOXG1P55316 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.73□□□□□ -0.21
FOXG1P55316 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
FOXG1P55316 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
FOXG1P55316 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
FOXG1P55316 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
FOXG1P55316 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
FOXG1P55316 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FOXG1P55316 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms