Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 ZNF890P-202ENST00000530367 1156 ntBASIC16.87■□□□□ 0.29
VCPP55072 AC055876.2-201ENST00000531834 546 ntBASIC16.87■□□□□ 0.29
VCPP55072 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.87■□□□□ 0.29
VCPP55072 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.87■□□□□ 0.29
VCPP55072 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.87■□□□□ 0.29
VCPP55072 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.87■□□□□ 0.29
VCPP55072 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCPP55072 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VCPP55072 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VCPP55072 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.86■□□□□ 0.29
VCPP55072 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
VCPP55072 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 AL589702.1-201ENST00000641229 1509 ntBASIC16.86■□□□□ 0.29
VCPP55072 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.86■□□□□ 0.29
VCPP55072 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VCPP55072 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.86■□□□□ 0.29
VCPP55072 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.86■□□□□ 0.29
VCPP55072 AC007389.4-201ENST00000454674 793 ntBASIC16.86■□□□□ 0.29
VCPP55072 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 AC099548.2-209ENST00000480264 625 ntBASIC16.86■□□□□ 0.29
VCPP55072 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 AL583810.1-201ENST00000553344 1045 ntBASIC16.86■□□□□ 0.29
VCPP55072 BANF1P1-201ENST00000553684 263 ntBASIC16.86■□□□□ 0.29
VCPP55072 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.86■□□□□ 0.29
VCPP55072 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.86■□□□□ 0.29
VCPP55072 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VCPP55072 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.86■□□□□ 0.29
VCPP55072 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.86■□□□□ 0.29
VCPP55072 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.86■□□□□ 0.29
VCPP55072 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VCPP55072 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
VCPP55072 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.86■□□□□ 0.29
VCPP55072 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCPP55072 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VCPP55072 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VCPP55072 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VCPP55072 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.85■□□□□ 0.29
VCPP55072 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.85■□□□□ 0.29
VCPP55072 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VCPP55072 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VCPP55072 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
VCPP55072 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.85■□□□□ 0.29
VCPP55072 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.85■□□□□ 0.29
VCPP55072 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.85■□□□□ 0.29
VCPP55072 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.85■□□□□ 0.29
VCPP55072 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VCPP55072 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.85■□□□□ 0.29
VCPP55072 AC044860.1-202ENST00000559481 777 ntBASIC16.85■□□□□ 0.29
VCPP55072 AC103810.3-201ENST00000583567 96 ntBASIC16.85■□□□□ 0.29
VCPP55072 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.85■□□□□ 0.29
VCPP55072 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.85■□□□□ 0.29
VCPP55072 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.85■□□□□ 0.29
VCPP55072 AC104640.1-201ENST00000562617 2109 ntBASIC16.85■□□□□ 0.29
VCPP55072 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.85■□□□□ 0.29
VCPP55072 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.85■□□□□ 0.29
VCPP55072 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCPP55072 PRAL-201ENST00000624952 3286 ntBASIC16.85■□□□□ 0.29
VCPP55072 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.85■□□□□ 0.29
VCPP55072 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VCPP55072 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCPP55072 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCPP55072 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VCPP55072 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms