Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
PDX1P52945 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PDX1P52945 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.26■□□□□ 0.03
PDX1P52945 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.26■□□□□ 0.03
PDX1P52945 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.26■□□□□ 0.03
PDX1P52945 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.26■□□□□ 0.03
PDX1P52945 AC245100.5-201ENST00000452108 331 ntBASIC15.26■□□□□ 0.03
PDX1P52945 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.26■□□□□ 0.03
PDX1P52945 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.26■□□□□ 0.03
PDX1P52945 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.26■□□□□ 0.03
PDX1P52945 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.26■□□□□ 0.03
PDX1P52945 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.26■□□□□ 0.03
PDX1P52945 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.26■□□□□ 0.03
PDX1P52945 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.26■□□□□ 0.03
PDX1P52945 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.26■□□□□ 0.03
PDX1P52945 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PDX1P52945 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.26■□□□□ 0.03
PDX1P52945 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDX1P52945 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PDX1P52945 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.26■□□□□ 0.03
PDX1P52945 AC007950.2-201ENST00000615045 2347 ntBASIC15.26■□□□□ 0.03
PDX1P52945 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
PDX1P52945 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.26■□□□□ 0.03
PDX1P52945 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PDX1P52945 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.25■□□□□ 0.03
PDX1P52945 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PDX1P52945 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PDX1P52945 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PDX1P52945 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 AL365203.3-201ENST00000609742 2057 ntBASIC15.25■□□□□ 0.03
PDX1P52945 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PDX1P52945 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.25■□□□□ 0.03
PDX1P52945 AC068587.6-202ENST00000641839 5619 ntBASIC15.25■□□□□ 0.03
PDX1P52945 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PDX1P52945 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PDX1P52945 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PDX1P52945 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.25■□□□□ 0.03
PDX1P52945 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.25■□□□□ 0.03
PDX1P52945 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.25■□□□□ 0.03
PDX1P52945 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.25■□□□□ 0.03
PDX1P52945 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.25■□□□□ 0.03
PDX1P52945 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PDX1P52945 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.25■□□□□ 0.03
PDX1P52945 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.25■□□□□ 0.03
PDX1P52945 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.25■□□□□ 0.03
PDX1P52945 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.25■□□□□ 0.03
PDX1P52945 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
PDX1P52945 MIR4525-201ENST00000580000 75 ntBASIC15.25■□□□□ 0.03
PDX1P52945 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.25■□□□□ 0.03
PDX1P52945 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.25■□□□□ 0.03
PDX1P52945 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.25■□□□□ 0.03
PDX1P52945 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.25■□□□□ 0.03
PDX1P52945 AL592424.1-201ENST00000563624 1536 ntBASIC15.25■□□□□ 0.03
PDX1P52945 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 CICP6-201ENST00000457191 2729 ntBASIC15.25■□□□□ 0.03
PDX1P52945 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
PDX1P52945 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.25■□□□□ 0.03
PDX1P52945 AC022188.1-201ENST00000620960 1664 ntBASIC15.25■□□□□ 0.03
PDX1P52945 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 AL603832.2-201ENST00000566195 2125 ntBASIC15.25■□□□□ 0.03
PDX1P52945 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PDX1P52945 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PDX1P52945 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms