Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFC5P40937 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFC5P40937 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFC5P40937 AL162726.2-201ENST00000438986 1017 ntBASIC17.31■□□□□ 0.36
RFC5P40937 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.31■□□□□ 0.36
RFC5P40937 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.31■□□□□ 0.36
RFC5P40937 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.31■□□□□ 0.36
RFC5P40937 VDAC1P7-201ENST00000462417 847 ntBASIC17.31■□□□□ 0.36
RFC5P40937 RN7SL837P-201ENST00000463010 287 ntBASIC17.31■□□□□ 0.36
RFC5P40937 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.31■□□□□ 0.36
RFC5P40937 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.31■□□□□ 0.36
RFC5P40937 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.31■□□□□ 0.36
RFC5P40937 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.31■□□□□ 0.36
RFC5P40937 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFC5P40937 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.31■□□□□ 0.36
RFC5P40937 IGHV3-72-202ENST00000621503 303 ntBASIC17.31■□□□□ 0.36
RFC5P40937 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.31■□□□□ 0.36
RFC5P40937 AL365203.3-201ENST00000609742 2057 ntBASIC17.31■□□□□ 0.36
RFC5P40937 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFC5P40937 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RFC5P40937 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFC5P40937 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
RFC5P40937 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RFC5P40937 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.31■□□□□ 0.36
RFC5P40937 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.31■□□□□ 0.36
RFC5P40937 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.3■□□□□ 0.36
RFC5P40937 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RFC5P40937 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RFC5P40937 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.3■□□□□ 0.36
RFC5P40937 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RFC5P40937 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.3■□□□□ 0.36
RFC5P40937 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RFC5P40937 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RFC5P40937 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RFC5P40937 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.3■□□□□ 0.36
RFC5P40937 GIMAP3P-201ENST00000495150 836 ntBASIC17.3■□□□□ 0.36
RFC5P40937 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 AL359711.2-201ENST00000563105 872 ntBASIC17.3■□□□□ 0.36
RFC5P40937 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.3■□□□□ 0.36
RFC5P40937 AC120045.2-201ENST00000567334 178 ntBASIC17.3■□□□□ 0.36
RFC5P40937 AC124283.3-201ENST00000570869 594 ntBASIC17.3■□□□□ 0.36
RFC5P40937 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.3■□□□□ 0.36
RFC5P40937 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.3■□□□□ 0.36
RFC5P40937 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.3■□□□□ 0.36
RFC5P40937 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.3■□□□□ 0.36
RFC5P40937 FER1L4-210ENST00000615531 5998 ntBASIC17.3■□□□□ 0.36
RFC5P40937 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.3■□□□□ 0.36
RFC5P40937 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RFC5P40937 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RFC5P40937 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RFC5P40937 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFC5P40937 KRT8P22-201ENST00000562317 1415 ntBASIC17.3■□□□□ 0.36
RFC5P40937 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
RFC5P40937 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RFC5P40937 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RFC5P40937 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.29■□□□□ 0.36
RFC5P40937 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.29■□□□□ 0.36
RFC5P40937 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.29■□□□□ 0.36
RFC5P40937 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RFC5P40937 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.29■□□□□ 0.36
RFC5P40937 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC5P40937 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.29■□□□□ 0.36
RFC5P40937 SOCS2P1-201ENST00000417727 557 ntBASIC17.29■□□□□ 0.36
RFC5P40937 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.29■□□□□ 0.36
RFC5P40937 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.29■□□□□ 0.36
RFC5P40937 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.29■□□□□ 0.36
RFC5P40937 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RFC5P40937 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.29■□□□□ 0.36
RFC5P40937 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.29■□□□□ 0.36
RFC5P40937 AC132938.2-201ENST00000579188 680 ntBASIC17.29■□□□□ 0.36
RFC5P40937 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms