Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.89□□□□□ -0.35
CEACAM3P40198 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CEACAM3P40198 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CEACAM3P40198 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CEACAM3P40198 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.88□□□□□ -0.35
CEACAM3P40198 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.88□□□□□ -0.35
CEACAM3P40198 AC010491.1-201ENST00000563101 2797 ntBASIC12.88□□□□□ -0.35
CEACAM3P40198 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CEACAM3P40198 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.88□□□□□ -0.35
CEACAM3P40198 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CEACAM3P40198 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.88□□□□□ -0.35
CEACAM3P40198 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 AZGP1P1-201ENST00000411909 902 ntBASIC12.88□□□□□ -0.35
CEACAM3P40198 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.88□□□□□ -0.35
CEACAM3P40198 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.88□□□□□ -0.35
CEACAM3P40198 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CEACAM3P40198 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.88□□□□□ -0.35
CEACAM3P40198 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.88□□□□□ -0.35
CEACAM3P40198 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.88□□□□□ -0.35
CEACAM3P40198 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.88□□□□□ -0.35
CEACAM3P40198 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.88□□□□□ -0.35
CEACAM3P40198 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.88□□□□□ -0.35
CEACAM3P40198 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.88□□□□□ -0.35
CEACAM3P40198 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.88□□□□□ -0.35
CEACAM3P40198 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.88□□□□□ -0.35
CEACAM3P40198 AC027796.2-201ENST00000575326 344 ntBASIC12.88□□□□□ -0.35
CEACAM3P40198 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.88□□□□□ -0.35
CEACAM3P40198 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.88□□□□□ -0.35
CEACAM3P40198 AL590560.3-201ENST00000623350 461 ntBASIC12.88□□□□□ -0.35
CEACAM3P40198 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CEACAM3P40198 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CEACAM3P40198 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.88□□□□□ -0.35
CEACAM3P40198 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.88□□□□□ -0.35
CEACAM3P40198 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.88□□□□□ -0.35
CEACAM3P40198 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.88□□□□□ -0.35
CEACAM3P40198 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.88□□□□□ -0.35
CEACAM3P40198 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CEACAM3P40198 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
CEACAM3P40198 AL365209.1-201ENST00000624418 6473 ntBASIC12.88□□□□□ -0.35
CEACAM3P40198 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.88□□□□□ -0.35
CEACAM3P40198 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.88□□□□□ -0.35
CEACAM3P40198 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CEACAM3P40198 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.87□□□□□ -0.35
CEACAM3P40198 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CEACAM3P40198 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CEACAM3P40198 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CEACAM3P40198 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.87□□□□□ -0.35
CEACAM3P40198 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms