Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
HMGCLP35914 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
HMGCLP35914 RN7SL204P-201ENST00000582831 262 ntBASIC15.62■□□□□ 0.09
HMGCLP35914 LINC02560-201ENST00000596379 459 ntBASIC15.62■□□□□ 0.09
HMGCLP35914 AC008761.3-201ENST00000624803 892 ntBASIC15.62■□□□□ 0.09
HMGCLP35914 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
HMGCLP35914 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
HMGCLP35914 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGCLP35914 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCLP35914 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCLP35914 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCLP35914 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGCLP35914 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGCLP35914 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGCLP35914 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCLP35914 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCLP35914 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HMGCLP35914 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCLP35914 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGCLP35914 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCLP35914 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCLP35914 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGCLP35914 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
HMGCLP35914 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HMGCLP35914 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HMGCLP35914 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGCLP35914 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
HMGCLP35914 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGCLP35914 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGCLP35914 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGCLP35914 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGCLP35914 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.61■□□□□ 0.09
HMGCLP35914 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.61■□□□□ 0.09
HMGCLP35914 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.61■□□□□ 0.09
HMGCLP35914 AC023310.3-201ENST00000557027 670 ntBASIC15.61■□□□□ 0.09
HMGCLP35914 AC100756.1-201ENST00000562736 682 ntBASIC15.61■□□□□ 0.09
HMGCLP35914 RRP7BP-205ENST00000566851 833 ntBASIC15.61■□□□□ 0.09
HMGCLP35914 AC138749.3-201ENST00000567691 622 ntBASIC15.61■□□□□ 0.09
HMGCLP35914 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCLP35914 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.61■□□□□ 0.09
HMGCLP35914 AC116165.1-201ENST00000611806 668 ntBASIC15.61■□□□□ 0.09
HMGCLP35914 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGCLP35914 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCLP35914 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCLP35914 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HMGCLP35914 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCLP35914 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCLP35914 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGCLP35914 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGCLP35914 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
HMGCLP35914 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCLP35914 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.6■□□□□ 0.09
HMGCLP35914 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.6■□□□□ 0.09
HMGCLP35914 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
HMGCLP35914 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 PPT1-215ENST00000641471 2368 ntBASIC15.6■□□□□ 0.09
HMGCLP35914 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGCLP35914 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
HMGCLP35914 AC002472.2-201ENST00000442739 958 ntBASIC15.6■□□□□ 0.09
HMGCLP35914 GNAQP1-201ENST00000444815 1067 ntBASIC15.6■□□□□ 0.09
HMGCLP35914 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGCLP35914 MIR4745-201ENST00000577608 62 ntBASIC15.6■□□□□ 0.09
HMGCLP35914 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.6■□□□□ 0.09
HMGCLP35914 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.6■□□□□ 0.09
HMGCLP35914 AC099568.2-201ENST00000609194 695 ntBASIC15.6■□□□□ 0.09
HMGCLP35914 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.6■□□□□ 0.09
HMGCLP35914 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.6■□□□□ 0.09
HMGCLP35914 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.6■□□□□ 0.09
HMGCLP35914 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGCLP35914 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HMGCLP35914 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.6■□□□□ 0.09
HMGCLP35914 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCLP35914 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HMGCLP35914 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms