Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHRNA3P32297 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.63■□□□□ 0.25
CHRNA3P32297 CICP24-201ENST00000605464 2705 ntBASIC16.62■□□□□ 0.25
CHRNA3P32297 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CHRNA3P32297 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA3P32297 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CHRNA3P32297 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA3P32297 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA3P32297 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRNA3P32297 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHRNA3P32297 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CHRNA3P32297 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.62■□□□□ 0.25
CHRNA3P32297 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA3P32297 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRNA3P32297 KLF2P3-201ENST00000451977 1087 ntBASIC16.62■□□□□ 0.25
CHRNA3P32297 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA3P32297 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.62■□□□□ 0.25
CHRNA3P32297 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.62■□□□□ 0.25
CHRNA3P32297 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA3P32297 RARRES2P9-201ENST00000565168 469 ntBASIC16.62■□□□□ 0.25
CHRNA3P32297 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.62■□□□□ 0.25
CHRNA3P32297 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CHRNA3P32297 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CHRNA3P32297 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHRNA3P32297 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.62■□□□□ 0.25
CHRNA3P32297 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHRNA3P32297 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA3P32297 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA3P32297 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA3P32297 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA3P32297 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA3P32297 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CHRNA3P32297 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA3P32297 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA3P32297 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHRNA3P32297 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA3P32297 AC125807.1-201ENST00000483097 614 ntBASIC16.61■□□□□ 0.25
CHRNA3P32297 AC098859.1-201ENST00000502915 1238 ntBASIC16.61■□□□□ 0.25
CHRNA3P32297 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.61■□□□□ 0.25
CHRNA3P32297 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA3P32297 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.61■□□□□ 0.25
CHRNA3P32297 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.61■□□□□ 0.25
CHRNA3P32297 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA3P32297 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.61■□□□□ 0.25
CHRNA3P32297 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA3P32297 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHRNA3P32297 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CHRNA3P32297 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA3P32297 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHRNA3P32297 AC009090.5-201ENST00000624886 2285 ntBASIC16.61■□□□□ 0.25
CHRNA3P32297 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CHRNA3P32297 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRNA3P32297 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRNA3P32297 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CHRNA3P32297 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHRNA3P32297 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 HLA-H-201ENST00000383620 1096 ntBASIC16.6■□□□□ 0.25
CHRNA3P32297 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 AC107890.1-201ENST00000422478 521 ntBASIC16.6■□□□□ 0.25
CHRNA3P32297 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRNA3P32297 AC243562.2-201ENST00000561247 970 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms