Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL391825.1-201ENST00000457671 1364 ntBASIC14□□□□□ -0.17
HOXC12P31275 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14□□□□□ -0.17
HOXC12P31275 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14□□□□□ -0.17
HOXC12P31275 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14□□□□□ -0.17
HOXC12P31275 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
HOXC12P31275 DGCR5-201ENST00000399539 862 ntBASIC14□□□□□ -0.17
HOXC12P31275 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 PGF-202ENST00000405431 666 ntTSL 5 BASIC14□□□□□ -0.17
HOXC12P31275 AP006294.1-201ENST00000415407 339 ntBASIC14□□□□□ -0.17
HOXC12P31275 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
HOXC12P31275 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 RN7SL752P-201ENST00000463779 287 ntBASIC14□□□□□ -0.17
HOXC12P31275 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC14□□□□□ -0.17
HOXC12P31275 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
HOXC12P31275 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14□□□□□ -0.17
HOXC12P31275 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14□□□□□ -0.17
HOXC12P31275 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14□□□□□ -0.17
HOXC12P31275 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14□□□□□ -0.17
HOXC12P31275 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 AL606495.2-201ENST00000605867 535 ntBASIC14□□□□□ -0.17
HOXC12P31275 AL844908.2-201ENST00000609461 460 ntBASIC14□□□□□ -0.17
HOXC12P31275 RNA5-8SN1-201ENST00000610460 153 ntBASIC14□□□□□ -0.17
HOXC12P31275 RNA5-8SN5-202ENST00000612463 153 ntBASIC14□□□□□ -0.17
HOXC12P31275 RNA5-8SN4-201ENST00000613359 153 ntBASIC14□□□□□ -0.17
HOXC12P31275 RNA5-8SN5-201ENST00000619471 153 ntBASIC14□□□□□ -0.17
HOXC12P31275 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14□□□□□ -0.17
HOXC12P31275 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14□□□□□ -0.17
HOXC12P31275 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HOXC12P31275 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HOXC12P31275 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXC12P31275 AC134407.2-201ENST00000625089 1978 ntBASIC14□□□□□ -0.17
HOXC12P31275 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14□□□□□ -0.17
HOXC12P31275 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14□□□□□ -0.17
HOXC12P31275 AL118508.1-201ENST00000613502 2345 ntBASIC13.99□□□□□ -0.17
HOXC12P31275 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.99□□□□□ -0.17
HOXC12P31275 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HOXC12P31275 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HOXC12P31275 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.99□□□□□ -0.17
HOXC12P31275 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.99□□□□□ -0.17
HOXC12P31275 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HOXC12P31275 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 AC067750.1-201ENST00000608826 6545 ntBASIC13.99□□□□□ -0.17
HOXC12P31275 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.99□□□□□ -0.17
HOXC12P31275 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HOXC12P31275 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HOXC12P31275 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
HOXC12P31275 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
HOXC12P31275 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HOXC12P31275 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HOXC12P31275 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 AC006449.5-201ENST00000610658 2098 ntBASIC13.99□□□□□ -0.17
HOXC12P31275 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HOXC12P31275 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.99□□□□□ -0.17
HOXC12P31275 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 AC087499.6-201ENST00000411576 835 ntBASIC13.99□□□□□ -0.17
HOXC12P31275 DFFBP1-201ENST00000433250 979 ntBASIC13.99□□□□□ -0.17
HOXC12P31275 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 AC011495.1-201ENST00000498085 584 ntBASIC13.99□□□□□ -0.17
HOXC12P31275 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.99□□□□□ -0.17
HOXC12P31275 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.99□□□□□ -0.17
HOXC12P31275 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.99□□□□□ -0.17
HOXC12P31275 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.99□□□□□ -0.17
HOXC12P31275 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HOXC12P31275 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms