Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.37□□□□□ -0.27
VAMP1P23763 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 AC104819.1-201ENST00000504587 486 ntBASIC13.37□□□□□ -0.27
VAMP1P23763 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.37□□□□□ -0.27
VAMP1P23763 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.37□□□□□ -0.27
VAMP1P23763 AC139887.3-201ENST00000568585 713 ntBASIC13.37□□□□□ -0.27
VAMP1P23763 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.37□□□□□ -0.27
VAMP1P23763 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
VAMP1P23763 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
VAMP1P23763 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
VAMP1P23763 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
VAMP1P23763 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
VAMP1P23763 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.37□□□□□ -0.27
VAMP1P23763 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VAMP1P23763 AC126365.1-201ENST00000578585 1514 ntBASIC13.37□□□□□ -0.27
VAMP1P23763 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 AL031432.4-201ENST00000641729 2190 ntBASIC13.37□□□□□ -0.27
VAMP1P23763 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VAMP1P23763 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.36□□□□□ -0.27
VAMP1P23763 AJ011931.1-201ENST00000618749 2492 ntBASIC13.36□□□□□ -0.27
VAMP1P23763 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
VAMP1P23763 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VAMP1P23763 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 LINC01230-201ENST00000625222 3017 ntBASIC13.36□□□□□ -0.27
VAMP1P23763 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.36□□□□□ -0.27
VAMP1P23763 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VAMP1P23763 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 TSSC2-201ENST00000450217 709 ntBASIC13.36□□□□□ -0.27
VAMP1P23763 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
VAMP1P23763 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.36□□□□□ -0.27
VAMP1P23763 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.36□□□□□ -0.27
VAMP1P23763 MIR5100-201ENST00000579544 119 ntBASIC13.36□□□□□ -0.27
VAMP1P23763 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
VAMP1P23763 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.36□□□□□ -0.27
VAMP1P23763 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC13.36□□□□□ -0.27
VAMP1P23763 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.36□□□□□ -0.27
VAMP1P23763 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.36□□□□□ -0.27
VAMP1P23763 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.36□□□□□ -0.27
VAMP1P23763 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VAMP1P23763 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VAMP1P23763 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.36□□□□□ -0.27
VAMP1P23763 AC129492.6-201ENST00000611383 1305 ntBASIC13.36□□□□□ -0.27
VAMP1P23763 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
VAMP1P23763 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VAMP1P23763 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
VAMP1P23763 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.36□□□□□ -0.27
VAMP1P23763 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VAMP1P23763 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
VAMP1P23763 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms