Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CCL1P22362 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.52□□□□□ -0.24
CCL1P22362 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL1P22362 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CCL1P22362 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL1P22362 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL1P22362 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL1P22362 FAM8A3P-201ENST00000427218 844 ntBASIC13.52□□□□□ -0.25
CCL1P22362 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL1P22362 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL1P22362 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.52□□□□□ -0.25
CCL1P22362 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL1P22362 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL1P22362 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL1P22362 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CCL1P22362 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CCL1P22362 AC015910.1-201ENST00000579400 975 ntBASIC13.52□□□□□ -0.25
CCL1P22362 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL1P22362 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL1P22362 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
CCL1P22362 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL1P22362 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL1P22362 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
CCL1P22362 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 AL390755.1-201ENST00000623716 2027 ntBASIC13.52□□□□□ -0.25
CCL1P22362 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL1P22362 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 FGD5P1-202ENST00000614866 2498 ntBASIC13.52□□□□□ -0.25
CCL1P22362 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
CCL1P22362 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL1P22362 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCL1P22362 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL1P22362 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCL1P22362 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL1P22362 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL1P22362 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL1P22362 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL1P22362 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCL1P22362 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 AL080243.2-201ENST00000418783 582 ntBASIC13.51□□□□□ -0.25
CCL1P22362 SPDYE7P-202ENST00000420373 878 ntBASIC13.51□□□□□ -0.25
CCL1P22362 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CCL1P22362 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL1P22362 MTND6P24-201ENST00000440466 518 ntBASIC13.51□□□□□ -0.25
CCL1P22362 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL1P22362 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
CCL1P22362 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL1P22362 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL1P22362 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL1P22362 AL512356.2-201ENST00000546955 174 ntBASIC13.51□□□□□ -0.25
CCL1P22362 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCL1P22362 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL1P22362 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL1P22362 MIR6080-201ENST00000617359 66 ntBASIC13.51□□□□□ -0.25
CCL1P22362 MIR6069-201ENST00000620069 79 ntBASIC13.51□□□□□ -0.25
CCL1P22362 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL1P22362 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL1P22362 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCL1P22362 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CCL1P22362 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CCL1P22362 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL1P22362 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL1P22362 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCL1P22362 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL1P22362 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL1P22362 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms