Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CD53P19397 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.37□□□□□ -0.11
CD53P19397 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.37□□□□□ -0.11
CD53P19397 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.37□□□□□ -0.11
CD53P19397 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CD53P19397 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.37□□□□□ -0.11
CD53P19397 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.37□□□□□ -0.11
CD53P19397 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CD53P19397 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.37□□□□□ -0.11
CD53P19397 MIR600HG-201ENST00000449175 5984 ntBASIC14.37□□□□□ -0.11
CD53P19397 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CD53P19397 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CD53P19397 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.37□□□□□ -0.11
CD53P19397 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CD53P19397 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CD53P19397 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.36□□□□□ -0.11
CD53P19397 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD53P19397 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CD53P19397 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.36□□□□□ -0.11
CD53P19397 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.36□□□□□ -0.11
CD53P19397 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.36□□□□□ -0.11
CD53P19397 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.36□□□□□ -0.11
CD53P19397 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CD53P19397 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD53P19397 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.36□□□□□ -0.11
CD53P19397 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.36□□□□□ -0.11
CD53P19397 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 ALG1L8P-201ENST00000533887 760 ntBASIC14.36□□□□□ -0.11
CD53P19397 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.36□□□□□ -0.11
CD53P19397 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.36□□□□□ -0.11
CD53P19397 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CD53P19397 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.36□□□□□ -0.11
CD53P19397 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CD53P19397 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CD53P19397 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.36□□□□□ -0.11
CD53P19397 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.36□□□□□ -0.11
CD53P19397 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.36□□□□□ -0.11
CD53P19397 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CD53P19397 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.36□□□□□ -0.11
CD53P19397 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CD53P19397 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.35□□□□□ -0.11
CD53P19397 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CD53P19397 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 WASH6P-202ENST00000359512 1437 ntBASIC14.35□□□□□ -0.11
CD53P19397 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.35□□□□□ -0.11
CD53P19397 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.35□□□□□ -0.11
CD53P19397 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CD53P19397 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CD53P19397 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.35□□□□□ -0.11
CD53P19397 AC092580.3-201ENST00000430932 139 ntBASIC14.35□□□□□ -0.11
CD53P19397 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.35□□□□□ -0.11
CD53P19397 AC027307.3-201ENST00000594262 1100 ntBASIC14.35□□□□□ -0.11
CD53P19397 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.35□□□□□ -0.11
CD53P19397 AL358472.5-202ENST00000641448 1267 ntBASIC14.35□□□□□ -0.11
CD53P19397 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CD53P19397 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.35□□□□□ -0.11
CD53P19397 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CD53P19397 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD53P19397 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms