Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PRKCAP17252 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.66□□□□□ -0.06
PRKCAP17252 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PRKCAP17252 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PRKCAP17252 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PRKCAP17252 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PRKCAP17252 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PRKCAP17252 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.65□□□□□ -0.06
PRKCAP17252 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.65□□□□□ -0.06
PRKCAP17252 AL359183.1-201ENST00000623796 2132 ntBASIC14.65□□□□□ -0.06
PRKCAP17252 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PRKCAP17252 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PRKCAP17252 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.65□□□□□ -0.06
PRKCAP17252 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PRKCAP17252 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PRKCAP17252 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 AL353705.2-201ENST00000428243 662 ntBASIC14.65□□□□□ -0.06
PRKCAP17252 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.65□□□□□ -0.06
PRKCAP17252 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 AL512356.2-201ENST00000546955 174 ntBASIC14.65□□□□□ -0.06
PRKCAP17252 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.65□□□□□ -0.06
PRKCAP17252 GPALPP1-207ENST00000611650 899 ntBASIC14.65□□□□□ -0.06
PRKCAP17252 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.65□□□□□ -0.06
PRKCAP17252 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
PRKCAP17252 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PRKCAP17252 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PRKCAP17252 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.65□□□□□ -0.06
PRKCAP17252 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.65□□□□□ -0.06
PRKCAP17252 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PRKCAP17252 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PRKCAP17252 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.64□□□□□ -0.07
PRKCAP17252 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
PRKCAP17252 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.64□□□□□ -0.07
PRKCAP17252 AP001282.1-201ENST00000531301 1499 ntBASIC14.64□□□□□ -0.07
PRKCAP17252 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PRKCAP17252 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.64□□□□□ -0.07
PRKCAP17252 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.64□□□□□ -0.07
PRKCAP17252 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PRKCAP17252 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PRKCAP17252 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 AL139400.1-201ENST00000366220 510 ntBASIC14.64□□□□□ -0.07
PRKCAP17252 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PRKCAP17252 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 SPDYE7P-202ENST00000420373 878 ntBASIC14.64□□□□□ -0.07
PRKCAP17252 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.64□□□□□ -0.07
PRKCAP17252 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.64□□□□□ -0.07
PRKCAP17252 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.64□□□□□ -0.07
PRKCAP17252 AC109322.1-201ENST00000524499 1264 ntBASIC14.64□□□□□ -0.07
PRKCAP17252 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.64□□□□□ -0.07
PRKCAP17252 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.64□□□□□ -0.07
PRKCAP17252 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.64□□□□□ -0.07
PRKCAP17252 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.64□□□□□ -0.07
PRKCAP17252 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.64□□□□□ -0.07
PRKCAP17252 MIR6080-201ENST00000617359 66 ntBASIC14.64□□□□□ -0.07
PRKCAP17252 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.64□□□□□ -0.07
PRKCAP17252 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.64□□□□□ -0.07
PRKCAP17252 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.64□□□□□ -0.07
PRKCAP17252 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PRKCAP17252 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms