Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 AC006449.5-201ENST00000610658 2098 ntBASIC17.41■□□□□ 0.38
ATP2A2P16615 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ATP2A2P16615 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATP2A2P16615 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP2A2P16615 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP2A2P16615 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP2A2P16615 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP2A2P16615 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
ATP2A2P16615 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP2A2P16615 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.41■□□□□ 0.38
ATP2A2P16615 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP2A2P16615 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.41■□□□□ 0.38
ATP2A2P16615 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATP2A2P16615 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2A2P16615 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.41■□□□□ 0.38
ATP2A2P16615 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ATP2A2P16615 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP2A2P16615 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ATP2A2P16615 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 AC005052.1-201ENST00000625181 2492 ntBASIC17.41■□□□□ 0.38
ATP2A2P16615 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATP2A2P16615 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ATP2A2P16615 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A2P16615 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2A2P16615 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2A2P16615 TSPY26P-202ENST00000565928 3884 ntBASIC17.4■□□□□ 0.38
ATP2A2P16615 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 CYP2T1P-202ENST00000641596 2535 ntBASIC17.4■□□□□ 0.38
ATP2A2P16615 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2A2P16615 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2A2P16615 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ATP2A2P16615 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
ATP2A2P16615 GOLGA2P4-201ENST00000441462 777 ntBASIC17.4■□□□□ 0.38
ATP2A2P16615 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP2A2P16615 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP2A2P16615 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A2P16615 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A2P16615 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2A2P16615 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP2A2P16615 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2A2P16615 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP2A2P16615 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.4■□□□□ 0.38
ATP2A2P16615 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A2P16615 AC132872.4-202ENST00000622924 2756 ntBASIC17.4■□□□□ 0.38
ATP2A2P16615 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A2P16615 GPAA1P2-202ENST00000606848 1787 ntBASIC17.4■□□□□ 0.38
ATP2A2P16615 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A2P16615 AC092171.3-201ENST00000610122 2651 ntBASIC17.4■□□□□ 0.38
ATP2A2P16615 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A2P16615 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ATP2A2P16615 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ATP2A2P16615 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ATP2A2P16615 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A2P16615 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A2P16615 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP2A2P16615 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP2A2P16615 AC079328.2-201ENST00000561241 3354 ntBASIC17.39■□□□□ 0.37
ATP2A2P16615 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A2P16615 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A2P16615 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A2P16615 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A2P16615 AC005229.1-201ENST00000392885 409 ntBASIC17.39■□□□□ 0.37
ATP2A2P16615 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A2P16615 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A2P16615 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.39■□□□□ 0.37
ATP2A2P16615 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A2P16615 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP2A2P16615 MIR3615-201ENST00000581999 87 ntBASIC17.39■□□□□ 0.37
ATP2A2P16615 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP2A2P16615 AC243960.2-201ENST00000600996 747 ntBASIC17.39■□□□□ 0.37
ATP2A2P16615 AL391069.4-201ENST00000609583 481 ntBASIC17.39■□□□□ 0.37
ATP2A2P16615 AL139099.5-201ENST00000635274 300 ntBASIC17.39■□□□□ 0.37
ATP2A2P16615 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
ATP2A2P16615 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms