Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.12□□□□□ -0.15
HLA-DOBP13765 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HLA-DOBP13765 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 TREML5P-201ENST00000421694 576 ntBASIC14.11□□□□□ -0.15
HLA-DOBP13765 AC107890.1-201ENST00000422478 521 ntBASIC14.11□□□□□ -0.15
HLA-DOBP13765 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 AC069120.2-201ENST00000524091 540 ntBASIC14.11□□□□□ -0.15
HLA-DOBP13765 AC027369.6-201ENST00000525520 931 ntBASIC14.11□□□□□ -0.15
HLA-DOBP13765 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 AL512361.1-201ENST00000554200 418 ntBASIC14.11□□□□□ -0.15
HLA-DOBP13765 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 AC073592.8-201ENST00000624126 511 ntBASIC14.11□□□□□ -0.15
HLA-DOBP13765 AL033527.5-202ENST00000641632 1098 ntBASIC14.11□□□□□ -0.15
HLA-DOBP13765 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DOBP13765 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.11□□□□□ -0.15
HLA-DOBP13765 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 AC138035.3-201ENST00000622706 2791 ntBASIC14.1□□□□□ -0.15
HLA-DOBP13765 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.1□□□□□ -0.15
HLA-DOBP13765 AC074338.1-201ENST00000416825 156 ntBASIC14.1□□□□□ -0.15
HLA-DOBP13765 AC092580.3-201ENST00000430932 139 ntBASIC14.1□□□□□ -0.15
HLA-DOBP13765 FAM86GP-201ENST00000448322 971 ntBASIC14.1□□□□□ -0.15
HLA-DOBP13765 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms