Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
HOXD8P13378 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXD8P13378 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXD8P13378 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXD8P13378 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXD8P13378 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXD8P13378 HOMER2P2-201ENST00000451621 847 ntBASIC17.1■□□□□ 0.33
HOXD8P13378 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXD8P13378 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXD8P13378 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXD8P13378 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXD8P13378 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HOXD8P13378 MIR4741-201ENST00000579822 90 ntBASIC17.1■□□□□ 0.33
HOXD8P13378 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXD8P13378 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXD8P13378 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXD8P13378 AC243960.2-201ENST00000600996 747 ntBASIC17.1■□□□□ 0.33
HOXD8P13378 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXD8P13378 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HOXD8P13378 AL139099.5-201ENST00000635274 300 ntBASIC17.1■□□□□ 0.33
HOXD8P13378 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.1■□□□□ 0.33
HOXD8P13378 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXD8P13378 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HOXD8P13378 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXD8P13378 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXD8P13378 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXD8P13378 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXD8P13378 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXD8P13378 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
HOXD8P13378 AC015818.8-201ENST00000587907 1519 ntBASIC17.1■□□□□ 0.33
HOXD8P13378 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HOXD8P13378 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXD8P13378 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXD8P13378 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXD8P13378 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXD8P13378 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXD8P13378 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXD8P13378 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXD8P13378 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXD8P13378 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXD8P13378 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.09■□□□□ 0.33
HOXD8P13378 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 TPM3P8-201ENST00000330554 643 ntBASIC17.09■□□□□ 0.33
HOXD8P13378 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HOXD8P13378 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HOXD8P13378 BTBD6P1-201ENST00000412176 1267 ntBASIC17.09■□□□□ 0.33
HOXD8P13378 POM121L8P-201ENST00000417732 1281 ntBASIC17.09■□□□□ 0.33
HOXD8P13378 AC007969.1-201ENST00000433675 447 ntBASIC17.09■□□□□ 0.33
HOXD8P13378 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXD8P13378 POM121L9P-203ENST00000441984 1285 ntBASIC17.09■□□□□ 0.33
HOXD8P13378 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
HOXD8P13378 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXD8P13378 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.09■□□□□ 0.33
HOXD8P13378 AL008638.5-201ENST00000623814 1298 ntBASIC17.09■□□□□ 0.33
HOXD8P13378 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HOXD8P13378 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXD8P13378 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXD8P13378 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 PCDH8P1-201ENST00000428983 2773 ntBASIC17.09■□□□□ 0.33
HOXD8P13378 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXD8P13378 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXD8P13378 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXD8P13378 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXD8P13378 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.08■□□□□ 0.33
HOXD8P13378 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXD8P13378 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXD8P13378 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXD8P13378 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
HOXD8P13378 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.08■□□□□ 0.33
HOXD8P13378 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.08■□□□□ 0.33
HOXD8P13378 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.08■□□□□ 0.33
HOXD8P13378 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.08■□□□□ 0.33
HOXD8P13378 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
HOXD8P13378 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.08■□□□□ 0.33
HOXD8P13378 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.08■□□□□ 0.33
HOXD8P13378 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HOXD8P13378 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXD8P13378 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.08■□□□□ 0.32
HOXD8P13378 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.08■□□□□ 0.32
HOXD8P13378 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXD8P13378 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXD8P13378 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXD8P13378 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXD8P13378 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms