Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.88□□□□□ -0.35
DEFA4P12838 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
DEFA4P12838 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.88□□□□□ -0.35
DEFA4P12838 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.88□□□□□ -0.35
DEFA4P12838 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.88□□□□□ -0.35
DEFA4P12838 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.88□□□□□ -0.35
DEFA4P12838 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
DEFA4P12838 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
DEFA4P12838 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
DEFA4P12838 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
DEFA4P12838 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.87□□□□□ -0.35
DEFA4P12838 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
DEFA4P12838 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.87□□□□□ -0.35
DEFA4P12838 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.87□□□□□ -0.35
DEFA4P12838 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.87□□□□□ -0.35
DEFA4P12838 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.87□□□□□ -0.35
DEFA4P12838 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
DEFA4P12838 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 MIR940-201ENST00000401276 94 ntBASIC12.87□□□□□ -0.35
DEFA4P12838 KRT18P2-201ENST00000447938 1258 ntBASIC12.87□□□□□ -0.35
DEFA4P12838 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.87□□□□□ -0.35
DEFA4P12838 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.87□□□□□ -0.35
DEFA4P12838 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.87□□□□□ -0.35
DEFA4P12838 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
DEFA4P12838 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
DEFA4P12838 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.87□□□□□ -0.35
DEFA4P12838 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.87□□□□□ -0.35
DEFA4P12838 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.87□□□□□ -0.35
DEFA4P12838 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.87□□□□□ -0.35
DEFA4P12838 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.87□□□□□ -0.35
DEFA4P12838 FAM197Y3-203ENST00000618346 717 ntBASIC12.87□□□□□ -0.35
DEFA4P12838 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.87□□□□□ -0.35
DEFA4P12838 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.87□□□□□ -0.35
DEFA4P12838 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
DEFA4P12838 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.87□□□□□ -0.35
DEFA4P12838 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
DEFA4P12838 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.87□□□□□ -0.35
DEFA4P12838 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
DEFA4P12838 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.87□□□□□ -0.35
DEFA4P12838 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
DEFA4P12838 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 AC073439.1-201ENST00000624121 1774 ntBASIC12.86□□□□□ -0.35
DEFA4P12838 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 AC026748.1-201ENST00000624349 3251 ntBASIC12.86□□□□□ -0.35
DEFA4P12838 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.86□□□□□ -0.35
DEFA4P12838 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
DEFA4P12838 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.86□□□□□ -0.35
DEFA4P12838 PRYP6-201ENST00000514804 343 ntBASIC12.86□□□□□ -0.35
DEFA4P12838 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
DEFA4P12838 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.86□□□□□ -0.35
DEFA4P12838 AC106730.1-201ENST00000566722 1090 ntBASIC12.86□□□□□ -0.35
DEFA4P12838 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
DEFA4P12838 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms