Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN1P07384 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.55■□□□□ 0.08
CAPN1P07384 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN1P07384 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.55■□□□□ 0.08
CAPN1P07384 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.55■□□□□ 0.08
CAPN1P07384 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN1P07384 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.55■□□□□ 0.08
CAPN1P07384 AC024267.1-201ENST00000582320 895 ntBASIC15.55■□□□□ 0.08
CAPN1P07384 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN1P07384 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.55■□□□□ 0.08
CAPN1P07384 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.55■□□□□ 0.08
CAPN1P07384 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CAPN1P07384 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CAPN1P07384 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CAPN1P07384 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CAPN1P07384 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 C8orf49-201ENST00000525043 1968 ntBASIC15.55■□□□□ 0.08
CAPN1P07384 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.55■□□□□ 0.08
CAPN1P07384 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CAPN1P07384 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN1P07384 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CAPN1P07384 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 TCAF2P1-201ENST00000291129 2421 ntBASIC15.54■□□□□ 0.08
CAPN1P07384 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN1P07384 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CAPN1P07384 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CAPN1P07384 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN1P07384 COX20P2-201ENST00000452636 358 ntBASIC15.54■□□□□ 0.08
CAPN1P07384 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.54■□□□□ 0.08
CAPN1P07384 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.54■□□□□ 0.08
CAPN1P07384 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.54■□□□□ 0.08
CAPN1P07384 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.54■□□□□ 0.08
CAPN1P07384 AL390754.1-201ENST00000619088 582 ntBASIC15.54■□□□□ 0.08
CAPN1P07384 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN1P07384 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 AC092127.1-201ENST00000567093 3455 ntBASIC15.54■□□□□ 0.08
CAPN1P07384 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
CAPN1P07384 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CAPN1P07384 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.54■□□□□ 0.08
CAPN1P07384 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPN1P07384 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.54■□□□□ 0.08
CAPN1P07384 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPN1P07384 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPN1P07384 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CAPN1P07384 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CAPN1P07384 AL691432.1-201ENST00000596308 1422 ntBASIC15.53■□□□□ 0.08
CAPN1P07384 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPN1P07384 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CAPN1P07384 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN1P07384 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN1P07384 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPN1P07384 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.53■□□□□ 0.08
CAPN1P07384 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.53■□□□□ 0.08
CAPN1P07384 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.53■□□□□ 0.08
CAPN1P07384 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.53■□□□□ 0.08
CAPN1P07384 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN1P07384 AC243562.2-201ENST00000561247 970 ntBASIC15.53■□□□□ 0.08
CAPN1P07384 RN7SL204P-201ENST00000582831 262 ntBASIC15.53■□□□□ 0.08
CAPN1P07384 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN1P07384 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPN1P07384 TMBIM7P-203ENST00000641617 1718 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms