Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1A1P05023 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1A1P05023 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1A1P05023 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1A1P05023 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1A1P05023 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP1A1P05023 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ATP1A1P05023 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1A1P05023 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1A1P05023 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
ATP1A1P05023 AC025580.3-201ENST00000617932 1424 ntBASIC16.79■□□□□ 0.28
ATP1A1P05023 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP1A1P05023 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ATP1A1P05023 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP1A1P05023 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ATP1A1P05023 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ATP1A1P05023 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ATP1A1P05023 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ATP1A1P05023 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP1A1P05023 RHOQP3-201ENST00000437982 621 ntBASIC16.78■□□□□ 0.28
ATP1A1P05023 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ATP1A1P05023 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP1A1P05023 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP1A1P05023 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
ATP1A1P05023 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP1A1P05023 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP1A1P05023 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ATP1A1P05023 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP1A1P05023 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ATP1A1P05023 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1A1P05023 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
ATP1A1P05023 CICP14-201ENST00000629111 2732 ntBASIC16.77■□□□□ 0.28
ATP1A1P05023 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1A1P05023 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP1A1P05023 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ATP1A1P05023 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP1A1P05023 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP1A1P05023 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATP1A1P05023 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1A1P05023 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1A1P05023 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1A1P05023 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ATP1A1P05023 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1A1P05023 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1A1P05023 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1A1P05023 YBX2P1-201ENST00000394192 760 ntBASIC16.77■□□□□ 0.28
ATP1A1P05023 KRT18P13-201ENST00000400056 1290 ntBASIC16.77■□□□□ 0.28
ATP1A1P05023 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP1A1P05023 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.77■□□□□ 0.28
ATP1A1P05023 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP1A1P05023 AL645939.2-201ENST00000427340 991 ntBASIC16.77■□□□□ 0.28
ATP1A1P05023 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP1A1P05023 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ATP1A1P05023 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP1A1P05023 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP1A1P05023 KRT19P2-202ENST00000557173 1012 ntBASIC16.77■□□□□ 0.28
ATP1A1P05023 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP1A1P05023 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP1A1P05023 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ATP1A1P05023 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
ATP1A1P05023 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP1A1P05023 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP1A1P05023 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATP1A1P05023 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1A1P05023 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1A1P05023 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ATP1A1P05023 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP1A1P05023 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1A1P05023 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1A1P05023 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP1A1P05023 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP1A1P05023 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP1A1P05023 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP1A1P05023 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP1A1P05023 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP1A1P05023 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ATP1A1P05023 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1A1P05023 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1A1P05023 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP1A1P05023 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1A1P05023 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms