Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PDGFBP01127 MIR1227-201ENST00000408484 88 ntBASIC15.59■□□□□ 0.09
PDGFBP01127 AC078991.1-201ENST00000437297 610 ntBASIC15.59■□□□□ 0.09
PDGFBP01127 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.59■□□□□ 0.09
PDGFBP01127 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.59■□□□□ 0.09
PDGFBP01127 CTBP2P4-201ENST00000513884 920 ntBASIC15.59■□□□□ 0.09
PDGFBP01127 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.59■□□□□ 0.09
PDGFBP01127 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.59■□□□□ 0.09
PDGFBP01127 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
PDGFBP01127 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.59■□□□□ 0.09
PDGFBP01127 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 AC005052.1-201ENST00000625181 2492 ntBASIC15.59■□□□□ 0.09
PDGFBP01127 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PDGFBP01127 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.59■□□□□ 0.09
PDGFBP01127 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PDGFBP01127 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PDGFBP01127 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PDGFBP01127 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PDGFBP01127 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDGFBP01127 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PDGFBP01127 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.58■□□□□ 0.09
PDGFBP01127 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.58■□□□□ 0.08
PDGFBP01127 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 AC004899.1-201ENST00000424687 1714 ntBASIC15.58■□□□□ 0.08
PDGFBP01127 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.58■□□□□ 0.08
PDGFBP01127 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.58■□□□□ 0.08
PDGFBP01127 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.58■□□□□ 0.08
PDGFBP01127 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.58■□□□□ 0.08
PDGFBP01127 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.58■□□□□ 0.08
PDGFBP01127 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.58■□□□□ 0.08
PDGFBP01127 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.58■□□□□ 0.08
PDGFBP01127 AC141586.1-203ENST00000567242 366 ntBASIC15.58■□□□□ 0.08
PDGFBP01127 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.58■□□□□ 0.08
PDGFBP01127 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PDGFBP01127 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.58■□□□□ 0.08
PDGFBP01127 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PDGFBP01127 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.58■□□□□ 0.08
PDGFBP01127 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PDGFBP01127 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
PDGFBP01127 AC005332.8-201ENST00000622750 2735 ntBASIC15.58■□□□□ 0.08
PDGFBP01127 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.58■□□□□ 0.08
PDGFBP01127 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.58■□□□□ 0.08
PDGFBP01127 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.58■□□□□ 0.08
PDGFBP01127 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFBP01127 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.57■□□□□ 0.08
PDGFBP01127 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.57■□□□□ 0.08
PDGFBP01127 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.57■□□□□ 0.08
PDGFBP01127 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.57■□□□□ 0.08
PDGFBP01127 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PDGFBP01127 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.57■□□□□ 0.08
PDGFBP01127 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PDGFBP01127 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFBP01127 ISCA2P1-201ENST00000425548 448 ntBASIC15.57■□□□□ 0.08
PDGFBP01127 AC097065.1-201ENST00000425737 517 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms